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Data Models for Biological Databases

The following is a list of published data models for biological databases. The majority of data models on this list are for relational databases. However, I have also included XML and object models where the focus is on data storage and not data manipulation. I have not attempted to judge the quality of the data models at all: the only criteria for inclusion on this list is the existence of a website or publication that includes the data model. If you know of a data model that I have missed, please e-mail me (melanie_renee_nelson at yahoo dot com).

Data models for sequence data

Data models for biological function data

Data models for gene expression array data

Data models for laboratory information management

Data models for proteomics

Data models for protein-protein interactions

Other biological data models

Primary author: Melanie Nelson
Last edited: 15 May 2004